Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 AC016769.1-201ENST00000409132 1010 ntBASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 TERF1P5-201ENST00000477545 1207 ntBASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGC3Q9UN70 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 MFSD11-216ENST00000590393 1141 ntBASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 AC022517.1-201ENST00000592429 346 ntBASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC3Q9UN70 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGC3Q9UN70 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGC3Q9UN70 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.89■■□□□ 1.1
PCDHGC3Q9UN70 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC3Q9UN70 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC3Q9UN70 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 AC007322.4-201ENST00000509611 723 ntBASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHGC3Q9UN70 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 DUX4L16-201ENST00000555130 1264 ntBASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHGC3Q9UN70 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms