Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 AL049796.1-201ENST00000565336 1766 ntBASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 MIR4281-201ENST00000580852 62 ntBASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN2Q9UHD9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.43■□□□□ 0.38
UBQLN2Q9UHD9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 AC239859.2-201ENST00000444165 318 ntBASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
UBQLN2Q9UHD9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 BX664725.1-201ENST00000438252 379 ntBASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN2Q9UHD9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 AC120498.9-201ENST00000339021 3867 ntBASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 AC112907.3-201ENST00000577781 2400 ntBASIC17.4■□□□□ 0.38
UBQLN2Q9UHD9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms