Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 KRT18P20-201ENST00000548986 1279 ntBASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NCKIPSDQ9NZQ3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 AC055733.4-201ENST00000638462 1354 ntBASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 UBE2DNL-204ENST00000602536 740 ntBASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 MYCNOS-205ENST00000641950 531 ntBASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NCKIPSDQ9NZQ3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCKIPSDQ9NZQ3 AP004607.7-201ENST00000527152 1677 ntBASIC20.89■□□□□ 0.94
NCKIPSDQ9NZQ3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NCKIPSDQ9NZQ3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.89■□□□□ 0.93
NCKIPSDQ9NZQ3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 DUX4L16-201ENST00000555130 1264 ntBASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 AC005181.1-201ENST00000604782 1256 ntBASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.88■□□□□ 0.93
NCKIPSDQ9NZQ3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NCKIPSDQ9NZQ3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKIPSDQ9NZQ3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKIPSDQ9NZQ3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.86■□□□□ 0.93
NCKIPSDQ9NZQ3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKIPSDQ9NZQ3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKIPSDQ9NZQ3 AC083906.2-201ENST00000511578 360 ntBASIC20.86■□□□□ 0.93
NCKIPSDQ9NZQ3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.86■□□□□ 0.93
NCKIPSDQ9NZQ3 AC138907.5-202ENST00000569484 235 ntBASIC20.86■□□□□ 0.93
NCKIPSDQ9NZQ3 AC142086.2-201ENST00000569753 217 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms