Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 RPS2P52-201ENST00000469610 820 ntBASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 UNC93B5-201ENST00000530315 699 ntBASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 CYP2T3P-201ENST00000601990 817 ntBASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NLGN3Q9NZ94 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 GCSHP5-201ENST00000443090 522 ntBASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 AP006294.2-201ENST00000641667 209 ntBASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 KRT17P1-201ENST00000399211 1546 ntBASIC20.31■□□□□ 0.84
NLGN3Q9NZ94 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 AL355472.2-201ENST00000422958 438 ntBASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 AC026366.1-201ENST00000488803 879 ntBASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NLGN3Q9NZ94 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 AC080038.3-201ENST00000623346 1952 ntBASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 AC128676.1-201ENST00000454392 318 ntBASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 AP003097.1-201ENST00000530657 1135 ntBASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NLGN3Q9NZ94 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 C11orf96-202ENST00000528572 1834 ntBASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 MCRIP2P1-201ENST00000394346 511 ntBASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
NLGN3Q9NZ94 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 AC026471.6-201ENST00000622954 1905 ntBASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 AL589743.5-201ENST00000616611 1050 ntBASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.27■□□□□ 0.84
NLGN3Q9NZ94 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NLGN3Q9NZ94 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NLGN3Q9NZ94 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
NLGN3Q9NZ94 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NLGN3Q9NZ94 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NLGN3Q9NZ94 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 AC010542.4-201ENST00000563151 1910 ntBASIC20.26■□□□□ 0.83
NLGN3Q9NZ94 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms