Protein–RNA interactions for Protein: Q9NVP1

DDX18, ATP-dependent RNA helicase DDX18, humanhuman

Known RBP Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX18Q9NVP1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX18Q9NVP1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 BX005040.4-201ENST00000637145 1518 ntBASIC19.93■□□□□ 0.78
DDX18Q9NVP1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX18Q9NVP1 AC003102.1-202ENST00000563394 1796 ntBASIC19.93■□□□□ 0.78
DDX18Q9NVP1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 AC105265.2-201ENST00000467189 838 ntBASIC19.92■□□□□ 0.78
DDX18Q9NVP1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX18Q9NVP1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 AC012414.1-201ENST00000556676 535 ntBASIC19.91■□□□□ 0.78
DDX18Q9NVP1 AL354811.1-201ENST00000610286 706 ntBASIC19.91■□□□□ 0.78
DDX18Q9NVP1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.91■□□□□ 0.78
DDX18Q9NVP1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX18Q9NVP1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX18Q9NVP1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms