Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN4Q9NRR5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN4Q9NRR5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 AC011484.1-201ENST00000377652 1995 ntBASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN4Q9NRR5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 AC006015.1-201ENST00000429970 570 ntBASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.03■□□□□ 0.64
UBQLN4Q9NRR5 PLK5-205ENST00000642079 1969 ntBASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 AC022517.1-201ENST00000592429 346 ntBASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 AC010536.3-201ENST00000620306 533 ntBASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBQLN4Q9NRR5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.02■□□□□ 0.63
UBQLN4Q9NRR5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBQLN4Q9NRR5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBQLN4Q9NRR5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.63
UBQLN4Q9NRR5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBQLN4Q9NRR5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.63
UBQLN4Q9NRR5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 AC006128.1-201ENST00000624704 1661 ntBASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 AC116050.2-201ENST00000612102 1779 ntBASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms