Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 UNC93B3-201ENST00000308076 687 ntBASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 AC133561.4-201ENST00000566112 224 ntBASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB16Q9NRJ7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 IGHV3-19-201ENST00000521488 291 ntBASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 MIR4767-201ENST00000582827 78 ntBASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB16Q9NRJ7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
PCDHB16Q9NRJ7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB16Q9NRJ7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB16Q9NRJ7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PCDHB16Q9NRJ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 AC026471.1-201ENST00000564629 3026 ntBASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHB16Q9NRJ7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB16Q9NRJ7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms