Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 FEM1AP1-201ENST00000431297 1995 ntBASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.22■□□□□ 0.67
CTPS2Q9NRF8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 LINC02228-203ENST00000641970 1355 ntBASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 YBX1P1-201ENST00000445822 960 ntBASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTPS2Q9NRF8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 LINC01521-201ENST00000504184 1943 ntBASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 AC123595.1-201ENST00000440769 1046 ntBASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 AC006128.1-201ENST00000624704 1661 ntBASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 AC019069.1-201ENST00000610008 1333 ntBASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.2■□□□□ 0.66
CTPS2Q9NRF8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 AC079140.4-201ENST00000507448 529 ntBASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms