Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 AC007225.1-201ENST00000566331 1836 ntBASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 AC079140.4-201ENST00000507448 529 ntBASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRTM1Q9HBL6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 AC008175.2-201ENST00000612840 297 ntBASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.9■□□□□ 0.78
LRTM1Q9HBL6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 KRT87P-202ENST00000534226 1464 ntBASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRTM1Q9HBL6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 POU5F1P4-201ENST00000413175 1085 ntBASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 AC011484.1-201ENST00000377652 1995 ntBASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
LRTM1Q9HBL6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 IRS3P-201ENST00000223076 1006 ntBASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 AC027702.1-201ENST00000563810 1770 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms