Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 LINC01521-201ENST00000504184 1943 ntBASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 AC245052.3-201ENST00000450182 901 ntBASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 AC004854.2-201ENST00000608450 1441 ntBASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LRRC40Q9H9A6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRC40Q9H9A6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRC40Q9H9A6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
LRRC40Q9H9A6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 FEM1AP1-201ENST00000431297 1995 ntBASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 KRT18P20-201ENST00000548986 1279 ntBASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 RARRES2P11-201ENST00000635158 484 ntBASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 AC011484.1-201ENST00000377652 1995 ntBASIC21.01■□□□□ 0.95
LRRC40Q9H9A6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC40Q9H9A6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC40Q9H9A6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC40Q9H9A6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21■□□□□ 0.95
LRRC40Q9H9A6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC40Q9H9A6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21■□□□□ 0.95
LRRC40Q9H9A6 SLC7A5P2-201ENST00000553010 536 ntBASIC21■□□□□ 0.95
LRRC40Q9H9A6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21■□□□□ 0.95
LRRC40Q9H9A6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC40Q9H9A6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC40Q9H9A6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC40Q9H9A6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21■□□□□ 0.95
LRRC40Q9H9A6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LRRC40Q9H9A6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LRRC40Q9H9A6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC40Q9H9A6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms