Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.67■□□□□ 0.42
MED28Q9H204 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MED28Q9H204 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MED28Q9H204 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MED28Q9H204 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
MED28Q9H204 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MED28Q9H204 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
MED28Q9H204 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.66■□□□□ 0.42
MED28Q9H204 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.66■□□□□ 0.42
MED28Q9H204 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.66■□□□□ 0.42
MED28Q9H204 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.66■□□□□ 0.42
MED28Q9H204 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.66■□□□□ 0.42
MED28Q9H204 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
MED28Q9H204 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
MED28Q9H204 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.66■□□□□ 0.42
MED28Q9H204 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MED28Q9H204 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.66■□□□□ 0.42
MED28Q9H204 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.65■□□□□ 0.42
MED28Q9H204 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.65■□□□□ 0.42
MED28Q9H204 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MED28Q9H204 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.65■□□□□ 0.42
MED28Q9H204 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.65■□□□□ 0.42
MED28Q9H204 DUX4L4-201ENST00000566884 1269 ntBASIC17.65■□□□□ 0.42
MED28Q9H204 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MED28Q9H204 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MED28Q9H204 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
MED28Q9H204 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.64■□□□□ 0.42
MED28Q9H204 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.64■□□□□ 0.41
MED28Q9H204 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 AC007225.1-201ENST00000566331 1836 ntBASIC17.64■□□□□ 0.41
MED28Q9H204 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.64■□□□□ 0.41
MED28Q9H204 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MED28Q9H204 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
MED28Q9H204 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MED28Q9H204 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MED28Q9H204 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MED28Q9H204 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
MED28Q9H204 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
MED28Q9H204 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.63■□□□□ 0.41
MED28Q9H204 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.63■□□□□ 0.41
MED28Q9H204 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.63■□□□□ 0.41
MED28Q9H204 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.63■□□□□ 0.41
MED28Q9H204 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MED28Q9H204 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.63■□□□□ 0.41
MED28Q9H204 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MED28Q9H204 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MED28Q9H204 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MED28Q9H204 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms