Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 KRASP1-201ENST00000407852 552 ntBASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 AC053503.5-201ENST00000601508 636 ntBASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 AC006538.3-201ENST00000612495 578 ntBASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 AC105020.6-201ENST00000621523 1217 ntBASIC19.83■□□□□ 0.77
CNTNAP3Q9BZ76 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP3Q9BZ76 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP3Q9BZ76 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CNTNAP3Q9BZ76 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.83■□□□□ 0.76
CNTNAP3Q9BZ76 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CNTNAP3Q9BZ76 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CNTNAP3Q9BZ76 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 AL031963.3-201ENST00000606441 850 ntBASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CNTNAP3Q9BZ76 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.8■□□□□ 0.76
CNTNAP3Q9BZ76 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 AL589743.5-201ENST00000616611 1050 ntBASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.79■□□□□ 0.76
CNTNAP3Q9BZ76 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNTNAP3Q9BZ76 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.78■□□□□ 0.76
CNTNAP3Q9BZ76 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNTNAP3Q9BZ76 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.78■□□□□ 0.76
CNTNAP3Q9BZ76 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.78■□□□□ 0.76
CNTNAP3Q9BZ76 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.78■□□□□ 0.76
CNTNAP3Q9BZ76 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.78■□□□□ 0.76
CNTNAP3Q9BZ76 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms