Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC5.6□□□□□ -1.51
LCE3DQ9BYE3 AC006128.1-201ENST00000624704 1661 ntBASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 AC120024.1-201ENST00000562672 995 ntBASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
LCE3DQ9BYE3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LCE3DQ9BYE3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 FER1L4-210ENST00000615531 5998 ntBASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC5.58□□□□□ -1.52
LCE3DQ9BYE3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms