Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 AC013268.1-206ENST00000638368 961 ntBASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 AC112229.1-201ENST00000639295 961 ntBASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCM2Q9BSQ5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 CDCA4P2-201ENST00000441182 718 ntBASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCM2Q9BSQ5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 AC091799.1-201ENST00000422823 811 ntBASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 AC007322.1-201ENST00000426983 750 ntBASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 AC026185.1-201ENST00000445748 174 ntBASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCM2Q9BSQ5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCM2Q9BSQ5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.39■□□□□ 0.86
CCM2Q9BSQ5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCM2Q9BSQ5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.39■□□□□ 0.86
CCM2Q9BSQ5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.39■□□□□ 0.86
CCM2Q9BSQ5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 AL137060.1-201ENST00000618151 2648 ntBASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 CNN2P6-201ENST00000439038 900 ntBASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 AC007322.4-201ENST00000509611 723 ntBASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.39■□□□□ 0.85
CCM2Q9BSQ5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 AL591742.1-201ENST00000604433 565 ntBASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCM2Q9BSQ5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 AC005229.4-201ENST00000610085 2198 ntBASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 RAP2CP1-201ENST00000605103 478 ntBASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCM2Q9BSQ5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 AC090192.1-201ENST00000517740 490 ntBASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCM2Q9BSQ5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms