Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.67■□□□□ 0.1
VGLL1Q99990 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VGLL1Q99990 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 AC009237.3-201ENST00000393279 1427 ntBASIC15.67■□□□□ 0.1
VGLL1Q99990 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.67■□□□□ 0.1
VGLL1Q99990 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VGLL1Q99990 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
VGLL1Q99990 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VGLL1Q99990 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
VGLL1Q99990 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.66■□□□□ 0.1
VGLL1Q99990 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VGLL1Q99990 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.66■□□□□ 0.1
VGLL1Q99990 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
VGLL1Q99990 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.66■□□□□ 0.1
VGLL1Q99990 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
VGLL1Q99990 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 AC055733.4-201ENST00000638462 1354 ntBASIC15.65■□□□□ 0.1
VGLL1Q99990 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.65■□□□□ 0.1
VGLL1Q99990 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.65■□□□□ 0.1
VGLL1Q99990 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.65■□□□□ 0.1
VGLL1Q99990 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.65■□□□□ 0.1
VGLL1Q99990 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.65■□□□□ 0.1
VGLL1Q99990 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 PCDHAC2-203ENST00000615316 3011 ntBASIC15.65■□□□□ 0.1
VGLL1Q99990 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VGLL1Q99990 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
VGLL1Q99990 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.1
VGLL1Q99990 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VGLL1Q99990 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.64■□□□□ 0.09
VGLL1Q99990 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
VGLL1Q99990 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
VGLL1Q99990 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
VGLL1Q99990 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
VGLL1Q99990 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.64■□□□□ 0.09
VGLL1Q99990 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 IGHV3-19-201ENST00000521488 291 ntBASIC15.64■□□□□ 0.09
VGLL1Q99990 AC024257.2-201ENST00000549699 147 ntBASIC15.64■□□□□ 0.09
VGLL1Q99990 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.64■□□□□ 0.09
VGLL1Q99990 AC007952.6-201ENST00000573168 2673 ntBASIC15.64■□□□□ 0.09
VGLL1Q99990 AC003957.1-201ENST00000625108 2673 ntBASIC15.64■□□□□ 0.09
VGLL1Q99990 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VGLL1Q99990 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VGLL1Q99990 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.64■□□□□ 0.09
VGLL1Q99990 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.64■□□□□ 0.09
VGLL1Q99990 AC027702.1-201ENST00000563810 1770 ntBASIC15.64■□□□□ 0.09
VGLL1Q99990 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VGLL1Q99990 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.64■□□□□ 0.09
VGLL1Q99990 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VGLL1Q99990 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
VGLL1Q99990 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VGLL1Q99990 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.63■□□□□ 0.09
VGLL1Q99990 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.63■□□□□ 0.09
VGLL1Q99990 AL136162.1-201ENST00000607711 1078 ntBASIC15.63■□□□□ 0.09
VGLL1Q99990 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.63■□□□□ 0.09
VGLL1Q99990 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 AC007225.1-201ENST00000566331 1836 ntBASIC15.63■□□□□ 0.09
VGLL1Q99990 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VGLL1Q99990 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms