Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CPNE1Q99829 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CPNE1Q99829 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE1Q99829 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE1Q99829 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE1Q99829 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE1Q99829 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.72■□□□□ 0.91
CPNE1Q99829 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE1Q99829 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE1Q99829 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE1Q99829 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE1Q99829 AC020907.5-201ENST00000624372 1936 ntBASIC20.72■□□□□ 0.91
CPNE1Q99829 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.72■□□□□ 0.91
CPNE1Q99829 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE1Q99829 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE1Q99829 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CPNE1Q99829 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE1Q99829 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE1Q99829 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPNE1Q99829 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.71■□□□□ 0.91
CPNE1Q99829 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE1Q99829 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.71■□□□□ 0.91
CPNE1Q99829 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPNE1Q99829 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE1Q99829 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.71■□□□□ 0.91
CPNE1Q99829 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.71■□□□□ 0.91
CPNE1Q99829 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE1Q99829 SUDS3P1-201ENST00000505831 966 ntBASIC20.71■□□□□ 0.91
CPNE1Q99829 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE1Q99829 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE1Q99829 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.71■□□□□ 0.91
CPNE1Q99829 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE1Q99829 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE1Q99829 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE1Q99829 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CPNE1Q99829 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CPNE1Q99829 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE1Q99829 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPNE1Q99829 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
CPNE1Q99829 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.7■□□□□ 0.9
CPNE1Q99829 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE1Q99829 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE1Q99829 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CPNE1Q99829 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE1Q99829 AC008175.2-201ENST00000612840 297 ntBASIC20.7■□□□□ 0.9
CPNE1Q99829 AL358852.1-201ENST00000623174 1268 ntBASIC20.7■□□□□ 0.9
CPNE1Q99829 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE1Q99829 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE1Q99829 FP700111.2-201ENST00000619190 1892 ntBASIC20.7■□□□□ 0.9
CPNE1Q99829 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CPNE1Q99829 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE1Q99829 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE1Q99829 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE1Q99829 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE1Q99829 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CPNE1Q99829 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.69■□□□□ 0.9
CPNE1Q99829 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE1Q99829 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE1Q99829 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE1Q99829 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE1Q99829 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE1Q99829 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CPNE1Q99829 POU5F1P4-201ENST00000413175 1085 ntBASIC20.69■□□□□ 0.9
CPNE1Q99829 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.69■□□□□ 0.9
CPNE1Q99829 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE1Q99829 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE1Q99829 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CPNE1Q99829 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CPNE1Q99829 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.69■□□□□ 0.9
CPNE1Q99829 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE1Q99829 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE1Q99829 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.68■□□□□ 0.9
CPNE1Q99829 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE1Q99829 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.68■□□□□ 0.9
CPNE1Q99829 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE1Q99829 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.68■□□□□ 0.9
CPNE1Q99829 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.68■□□□□ 0.9
CPNE1Q99829 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.68■□□□□ 0.9
CPNE1Q99829 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE1Q99829 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CPNE1Q99829 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CPNE1Q99829 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE1Q99829 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.67■□□□□ 0.9
CPNE1Q99829 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CPNE1Q99829 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.67■□□□□ 0.9
CPNE1Q99829 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CPNE1Q99829 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.67■□□□□ 0.9
CPNE1Q99829 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.67■□□□□ 0.9
CPNE1Q99829 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.67■□□□□ 0.9
CPNE1Q99829 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.67■□□□□ 0.9
CPNE1Q99829 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE1Q99829 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms