Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
LITAFQ99732 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.82□□□□□ -0.2
LITAFQ99732 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LITAFQ99732 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LITAFQ99732 U85056.1-201ENST00000616429 682 ntBASIC13.82□□□□□ -0.2
LITAFQ99732 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LITAFQ99732 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LITAFQ99732 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.82□□□□□ -0.2
LITAFQ99732 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LITAFQ99732 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LITAFQ99732 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.81□□□□□ -0.2
LITAFQ99732 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.81□□□□□ -0.2
LITAFQ99732 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
LITAFQ99732 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC13.81□□□□□ -0.2
LITAFQ99732 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LITAFQ99732 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.81□□□□□ -0.2
LITAFQ99732 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.81□□□□□ -0.2
LITAFQ99732 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LITAFQ99732 PVT1_1.1-201ENST00000615125 194 ntBASIC13.81□□□□□ -0.2
LITAFQ99732 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.81□□□□□ -0.2
LITAFQ99732 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LITAFQ99732 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.81□□□□□ -0.2
LITAFQ99732 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.8□□□□□ -0.2
LITAFQ99732 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.8□□□□□ -0.2
LITAFQ99732 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.8□□□□□ -0.2
LITAFQ99732 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LITAFQ99732 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.8□□□□□ -0.2
LITAFQ99732 KRT18P60-201ENST00000312876 1297 ntBASIC13.8□□□□□ -0.2
LITAFQ99732 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.8□□□□□ -0.2
LITAFQ99732 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.8□□□□□ -0.2
LITAFQ99732 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC13.8□□□□□ -0.2
LITAFQ99732 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 AC068587.7-201ENST00000641602 218 ntBASIC13.8□□□□□ -0.2
LITAFQ99732 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.8□□□□□ -0.2
LITAFQ99732 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LITAFQ99732 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LITAFQ99732 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LITAFQ99732 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LITAFQ99732 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
LITAFQ99732 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.79□□□□□ -0.2
LITAFQ99732 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.79□□□□□ -0.2
LITAFQ99732 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LITAFQ99732 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC13.79□□□□□ -0.2
LITAFQ99732 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms