Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00479Q96M42 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00479Q96M42 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LINC00479Q96M42 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.8■□□□□ 0.12
LINC00479Q96M42 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.8■□□□□ 0.12
LINC00479Q96M42 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC00479Q96M42 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
LINC00479Q96M42 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.8■□□□□ 0.12
LINC00479Q96M42 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00479Q96M42 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.8■□□□□ 0.12
LINC00479Q96M42 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LINC00479Q96M42 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00479Q96M42 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00479Q96M42 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC00479Q96M42 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC00479Q96M42 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC00479Q96M42 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC00479Q96M42 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LINC00479Q96M42 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC00479Q96M42 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00479Q96M42 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LINC00479Q96M42 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00479Q96M42 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC00479Q96M42 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00479Q96M42 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC00479Q96M42 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LINC00479Q96M42 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00479Q96M42 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LINC00479Q96M42 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00479Q96M42 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00479Q96M42 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LINC00479Q96M42 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00479Q96M42 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
LINC00479Q96M42 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms