Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLCO4A1Q96BD0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLCO4A1Q96BD0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLCO4A1Q96BD0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLCO4A1Q96BD0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.39■□□□□ 0.7
SLCO4A1Q96BD0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 AL158211.5-201ENST00000623583 2518 ntBASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 BX005040.4-201ENST00000637145 1518 ntBASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLCO4A1Q96BD0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 GUSBP5-201ENST00000418136 578 ntBASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 KRT16P3-201ENST00000439127 1283 ntBASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SLCO4A1Q96BD0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 MIR6724-1-201ENST00000616420 92 ntBASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 MIR6724-2-201ENST00000616483 92 ntBASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 MIR6724-4-201ENST00000617390 92 ntBASIC19.37■□□□□ 0.69
SLCO4A1Q96BD0 MIR6724-3-201ENST00000622482 92 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms