Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NPIPB3Q92617 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB3Q92617 BX005040.4-201ENST00000637145 1518 ntBASIC16.34■□□□□ 0.21
NPIPB3Q92617 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB3Q92617 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB3Q92617 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB3Q92617 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.33■□□□□ 0.21
NPIPB3Q92617 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPB3Q92617 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPB3Q92617 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 PBX2P1-201ENST00000493219 1291 ntBASIC16.33■□□□□ 0.2
NPIPB3Q92617 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 AC027682.1-201ENST00000562846 899 ntBASIC16.33■□□□□ 0.2
NPIPB3Q92617 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.33■□□□□ 0.2
NPIPB3Q92617 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB3Q92617 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB3Q92617 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB3Q92617 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB3Q92617 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB3Q92617 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB3Q92617 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB3Q92617 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
NPIPB3Q92617 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB3Q92617 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPIPB3Q92617 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 AC096631.2-201ENST00000436136 790 ntBASIC16.31■□□□□ 0.2
NPIPB3Q92617 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.31■□□□□ 0.2
NPIPB3Q92617 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.31■□□□□ 0.2
NPIPB3Q92617 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPIPB3Q92617 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB3Q92617 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB3Q92617 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB3Q92617 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB3Q92617 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB3Q92617 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB3Q92617 AC008406.3-201ENST00000620001 1374 ntBASIC16.3■□□□□ 0.2
NPIPB3Q92617 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB3Q92617 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NPIPB3Q92617 AC007225.1-201ENST00000566331 1836 ntBASIC16.3■□□□□ 0.2
NPIPB3Q92617 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NPIPB3Q92617 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPB3Q92617 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPB3Q92617 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms