Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 OR10C1-204ENST00000622521 1039 ntBASIC19.52■□□□□ 0.72
TM9SF4Q92544 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TM9SF4Q92544 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM9SF4Q92544 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM9SF4Q92544 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM9SF4Q92544 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM9SF4Q92544 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TM9SF4Q92544 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.51■□□□□ 0.71
TM9SF4Q92544 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 POU5F1P4-201ENST00000413175 1085 ntBASIC19.51■□□□□ 0.71
TM9SF4Q92544 CYP2T1P-201ENST00000432607 1285 ntBASIC19.51■□□□□ 0.71
TM9SF4Q92544 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.51■□□□□ 0.71
TM9SF4Q92544 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.51■□□□□ 0.71
TM9SF4Q92544 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.51■□□□□ 0.71
TM9SF4Q92544 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TM9SF4Q92544 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.51■□□□□ 0.71
TM9SF4Q92544 MKRN4P-201ENST00000444706 1521 ntBASIC19.51■□□□□ 0.71
TM9SF4Q92544 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM9SF4Q92544 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF4Q92544 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF4Q92544 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF4Q92544 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF4Q92544 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF4Q92544 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM9SF4Q92544 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.5■□□□□ 0.71
TM9SF4Q92544 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TM9SF4Q92544 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TM9SF4Q92544 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TM9SF4Q92544 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TM9SF4Q92544 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TM9SF4Q92544 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM9SF4Q92544 AC068338.2-201ENST00000563278 1430 ntBASIC19.49■□□□□ 0.71
TM9SF4Q92544 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF4Q92544 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF4Q92544 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF4Q92544 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TM9SF4Q92544 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF4Q92544 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM9SF4Q92544 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms