Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CHD6Q8TD26 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHD6Q8TD26 LIN28AP1-201ENST00000429574 405 ntBASIC19.03■□□□□ 0.64
CHD6Q8TD26 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.03■□□□□ 0.64
CHD6Q8TD26 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD6Q8TD26 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD6Q8TD26 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD6Q8TD26 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD6Q8TD26 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD6Q8TD26 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHD6Q8TD26 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.02■□□□□ 0.64
CHD6Q8TD26 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.02■□□□□ 0.64
CHD6Q8TD26 AL671883.3-201ENST00000603274 991 ntBASIC19.02■□□□□ 0.64
CHD6Q8TD26 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHD6Q8TD26 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.02■□□□□ 0.64
CHD6Q8TD26 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CHD6Q8TD26 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.02■□□□□ 0.64
CHD6Q8TD26 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD6Q8TD26 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHD6Q8TD26 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CHD6Q8TD26 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD6Q8TD26 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHD6Q8TD26 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHD6Q8TD26 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.02■□□□□ 0.63
CHD6Q8TD26 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.01■□□□□ 0.63
CHD6Q8TD26 SLC25A1P4-201ENST00000567977 778 ntBASIC19.01■□□□□ 0.63
CHD6Q8TD26 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.01■□□□□ 0.63
CHD6Q8TD26 DUSP8P3-201ENST00000399571 1760 ntBASIC19.01■□□□□ 0.63
CHD6Q8TD26 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHD6Q8TD26 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHD6Q8TD26 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHD6Q8TD26 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHD6Q8TD26 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHD6Q8TD26 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.01■□□□□ 0.63
CHD6Q8TD26 AC092183.1-201ENST00000469884 875 ntBASIC19.01■□□□□ 0.63
CHD6Q8TD26 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.01■□□□□ 0.63
CHD6Q8TD26 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.01■□□□□ 0.63
CHD6Q8TD26 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19■□□□□ 0.63
CHD6Q8TD26 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19■□□□□ 0.63
CHD6Q8TD26 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19■□□□□ 0.63
CHD6Q8TD26 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19■□□□□ 0.63
CHD6Q8TD26 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 AL353807.1-201ENST00000427475 662 ntBASIC19■□□□□ 0.63
CHD6Q8TD26 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
CHD6Q8TD26 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD6Q8TD26 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHD6Q8TD26 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.99■□□□□ 0.63
CHD6Q8TD26 MCRIP2P1-201ENST00000394346 511 ntBASIC18.99■□□□□ 0.63
CHD6Q8TD26 RNF152P1-201ENST00000397754 604 ntBASIC18.99■□□□□ 0.63
CHD6Q8TD26 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHD6Q8TD26 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD6Q8TD26 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHD6Q8TD26 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.98■□□□□ 0.63
CHD6Q8TD26 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD6Q8TD26 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD6Q8TD26 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHD6Q8TD26 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD6Q8TD26 AC053503.5-201ENST00000601508 636 ntBASIC18.98■□□□□ 0.63
CHD6Q8TD26 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CHD6Q8TD26 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD6Q8TD26 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD6Q8TD26 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD6Q8TD26 AL022342.1-201ENST00000400363 863 ntBASIC18.98■□□□□ 0.63
CHD6Q8TD26 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CHD6Q8TD26 AC008622.2-201ENST00000617006 1229 ntBASIC18.98■□□□□ 0.63
CHD6Q8TD26 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.98■□□□□ 0.63
CHD6Q8TD26 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD6Q8TD26 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD6Q8TD26 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 AC128688.1-201ENST00000487626 519 ntBASIC18.97■□□□□ 0.63
CHD6Q8TD26 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD6Q8TD26 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD6Q8TD26 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms