Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
LINC01006Q8NI28 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LINC01006Q8NI28 AC116050.2-201ENST00000612102 1779 ntBASIC16.21■□□□□ 0.18
LINC01006Q8NI28 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 SOX15-203ENST00000570788 1093 ntBASIC16.2■□□□□ 0.18
LINC01006Q8NI28 RN7SL471P-201ENST00000580476 299 ntBASIC16.2■□□□□ 0.18
LINC01006Q8NI28 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 AC105020.6-201ENST00000621523 1217 ntBASIC16.2■□□□□ 0.18
LINC01006Q8NI28 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01006Q8NI28 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 MIR718-201ENST00000390190 70 ntBASIC16.19■□□□□ 0.18
LINC01006Q8NI28 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.19■□□□□ 0.18
LINC01006Q8NI28 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01006Q8NI28 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01006Q8NI28 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms