Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ZFP28Q8NHY6 AC005224.4-201ENST00000583262 1652 ntBASIC19.94■□□□□ 0.78
ZFP28Q8NHY6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ZFP28Q8NHY6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 AL354811.1-201ENST00000610286 706 ntBASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 AC055733.4-201ENST00000638462 1354 ntBASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ZFP28Q8NHY6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ZFP28Q8NHY6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 AC012414.1-201ENST00000556676 535 ntBASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZFP28Q8NHY6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 AL358852.1-201ENST00000623174 1268 ntBASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.89■□□□□ 0.77
ZFP28Q8NHY6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms