Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 AC091799.1-201ENST00000422823 811 ntBASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 CNN2P6-201ENST00000439038 900 ntBASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.81■■□□□ 1.08
SCUBE3Q8IX30 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 CDCA4P2-201ENST00000441182 718 ntBASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 AC073111.5-205ENST00000641717 521 ntBASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SCUBE3Q8IX30 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 AC013268.1-206ENST00000638368 961 ntBASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 AC112229.1-201ENST00000639295 961 ntBASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE3Q8IX30 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 PLK5-205ENST00000642079 1969 ntBASIC21.78■■□□□ 1.08
SCUBE3Q8IX30 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE3Q8IX30 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 AC007322.1-201ENST00000426983 750 ntBASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 RAP2CP1-201ENST00000605103 478 ntBASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 AC121338.2-201ENST00000622535 1744 ntBASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 AC231657.2-201ENST00000624556 255 ntBASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SCUBE3Q8IX30 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.75■■□□□ 1.07
SCUBE3Q8IX30 AL591742.1-201ENST00000604433 565 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms