Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 AP005435.1-201ENST00000529293 1178 ntBASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM42Q8IWZ5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 AL136116.3-201ENST00000402907 1138 ntBASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
TRIM42Q8IWZ5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 AL512631.2-201ENST00000604634 923 ntBASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 MIR4466-201ENST00000606121 54 ntBASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM42Q8IWZ5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM42Q8IWZ5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM42Q8IWZ5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms