Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 AC053503.5-201ENST00000601508 636 ntBASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RP1L1Q8IWN7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 AC139530.1-201ENST00000575312 1977 ntBASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RP1L1Q8IWN7 KRT17P2-201ENST00000300992 1314 ntBASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 RN7SL850P-201ENST00000579959 291 ntBASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RP1L1Q8IWN7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 KRT18P21-201ENST00000515767 1272 ntBASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 MTDHP1-201ENST00000605323 784 ntBASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.72■□□□□ 0.59
RP1L1Q8IWN7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.71■□□□□ 0.59
RP1L1Q8IWN7 MIR4785-201ENST00000585005 73 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms