Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AP004607.7-201ENST00000527152 1677 ntBASIC21.98■■□□□ 1.11
RNF135Q8IUD6 AC139530.1-201ENST00000575312 1977 ntBASIC21.98■■□□□ 1.11
RNF135Q8IUD6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF135Q8IUD6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 LSM12P1-201ENST00000411836 588 ntBASIC21.96■■□□□ 1.11
RNF135Q8IUD6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 CYP2T3P-201ENST00000601990 817 ntBASIC21.96■■□□□ 1.11
RNF135Q8IUD6 AC120498.10-201ENST00000621827 505 ntBASIC21.96■■□□□ 1.11
RNF135Q8IUD6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RNF135Q8IUD6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
RNF135Q8IUD6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RNF135Q8IUD6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF135Q8IUD6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF135Q8IUD6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms