Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL23A1Q86Y22 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.33■■□□□ 1.81
COL23A1Q86Y22 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 RARRES2P10-201ENST00000564312 460 ntBASIC26.32■■□□□ 1.8
COL23A1Q86Y22 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 C11orf96-202ENST00000528572 1834 ntBASIC26.32■■□□□ 1.8
COL23A1Q86Y22 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL23A1Q86Y22 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL23A1Q86Y22 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL23A1Q86Y22 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.29■■□□□ 1.8
COL23A1Q86Y22 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL23A1Q86Y22 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL23A1Q86Y22 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.29■■□□□ 1.8
COL23A1Q86Y22 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.29■■□□□ 1.8
COL23A1Q86Y22 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC26.29■■□□□ 1.8
COL23A1Q86Y22 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.29■■□□□ 1.8
COL23A1Q86Y22 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
COL23A1Q86Y22 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL23A1Q86Y22 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL23A1Q86Y22 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.26■■□□□ 1.79
COL23A1Q86Y22 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL23A1Q86Y22 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.26■■□□□ 1.79
COL23A1Q86Y22 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL23A1Q86Y22 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL23A1Q86Y22 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC26.26■■□□□ 1.79
COL23A1Q86Y22 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.26■■□□□ 1.79
COL23A1Q86Y22 AL049597.2-201ENST00000565575 961 ntBASIC26.26■■□□□ 1.79
COL23A1Q86Y22 AC006557.6-201ENST00000623071 864 ntBASIC26.26■■□□□ 1.79
COL23A1Q86Y22 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.26■■□□□ 1.79
COL23A1Q86Y22 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms