Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC105036.2-201ENST00000569468 176 ntBASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 AC016405.3-201ENST00000607710 860 ntBASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRTM4Q86VH4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 AC007322.3-201ENST00000426526 701 ntBASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 RARRES2P4-201ENST00000514074 484 ntBASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 AC104771.1-201ENST00000603335 964 ntBASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 FAM21FP-204ENST00000608637 956 ntBASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 PKD1P6-201ENST00000343738 4769 ntBASIC20.38■□□□□ 0.85
LRRTM4Q86VH4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRTM4Q86VH4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 AC116050.2-201ENST00000612102 1779 ntBASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRTM4Q86VH4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 AL024507.2-201ENST00000606070 2574 ntBASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 AL512625.2-201ENST00000417533 625 ntBASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 TSPY6P-201ENST00000448518 926 ntBASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LRRTM4Q86VH4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
LRRTM4Q86VH4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 GUSBP6-202ENST00000438529 1198 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms