Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC006128.1-201ENST00000624704 1661 ntBASIC20.68■□□□□ 0.9
LDB1Q86U70 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 AC026271.2-201ENST00000428091 497 ntBASIC20.68■□□□□ 0.9
LDB1Q86U70 AC034268.1-201ENST00000441047 882 ntBASIC20.68■□□□□ 0.9
LDB1Q86U70 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 NTF6G-201ENST00000591094 616 ntBASIC20.68■□□□□ 0.9
LDB1Q86U70 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
LDB1Q86U70 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.68■□□□□ 0.9
LDB1Q86U70 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LDB1Q86U70 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDB1Q86U70 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.67■□□□□ 0.9
LDB1Q86U70 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LDB1Q86U70 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.67■□□□□ 0.9
LDB1Q86U70 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.67■□□□□ 0.9
LDB1Q86U70 RARRES2P11-201ENST00000635158 484 ntBASIC20.67■□□□□ 0.9
LDB1Q86U70 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
LDB1Q86U70 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.67■□□□□ 0.9
LDB1Q86U70 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.67■□□□□ 0.9
LDB1Q86U70 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDB1Q86U70 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LDB1Q86U70 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LDB1Q86U70 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.66■□□□□ 0.9
LDB1Q86U70 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.66■□□□□ 0.9
LDB1Q86U70 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
LDB1Q86U70 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LDB1Q86U70 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LDB1Q86U70 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.66■□□□□ 0.9
LDB1Q86U70 RARRES2P6-201ENST00000567333 442 ntBASIC20.66■□□□□ 0.9
LDB1Q86U70 KRT16P2-201ENST00000414673 1423 ntBASIC20.66■□□□□ 0.9
LDB1Q86U70 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDB1Q86U70 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.65■□□□□ 0.9
LDB1Q86U70 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.65■□□□□ 0.9
LDB1Q86U70 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LDB1Q86U70 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.65■□□□□ 0.9
LDB1Q86U70 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.65■□□□□ 0.9
LDB1Q86U70 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.65■□□□□ 0.9
LDB1Q86U70 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.65■□□□□ 0.9
LDB1Q86U70 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.65■□□□□ 0.9
LDB1Q86U70 AC120498.10-201ENST00000621827 505 ntBASIC20.65■□□□□ 0.9
LDB1Q86U70 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LDB1Q86U70 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDB1Q86U70 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LDB1Q86U70 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.64■□□□□ 0.9
LDB1Q86U70 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LDB1Q86U70 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.64■□□□□ 0.89
LDB1Q86U70 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.64■□□□□ 0.89
LDB1Q86U70 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LDB1Q86U70 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDB1Q86U70 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.64■□□□□ 0.89
LDB1Q86U70 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.64■□□□□ 0.89
LDB1Q86U70 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms