Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RGPD4Q7Z3J3 KRT8P9-201ENST00000558927 1449 ntBASIC26.72■■□□□ 1.87
RGPD4Q7Z3J3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
RGPD4Q7Z3J3 AC005521.1-201ENST00000393351 872 ntBASIC26.72■■□□□ 1.87
RGPD4Q7Z3J3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.72■■□□□ 1.87
RGPD4Q7Z3J3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RGPD4Q7Z3J3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
RGPD4Q7Z3J3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RGPD4Q7Z3J3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RGPD4Q7Z3J3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
RGPD4Q7Z3J3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RGPD4Q7Z3J3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.7■■□□□ 1.87
RGPD4Q7Z3J3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 KRT18P57-201ENST00000443599 1254 ntBASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 DUT-205ENST00000558813 769 ntTSL 2 BASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 LINC01124-201ENST00000409786 2117 ntBASIC26.7■■□□□ 1.86
RGPD4Q7Z3J3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 TERF1P1-201ENST00000311003 1181 ntBASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 AC005829.2-201ENST00000571422 1056 ntBASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 AL353807.1-201ENST00000427475 662 ntBASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.69■■□□□ 1.86
RGPD4Q7Z3J3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RGPD4Q7Z3J3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RGPD4Q7Z3J3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
RGPD4Q7Z3J3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RGPD4Q7Z3J3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RGPD4Q7Z3J3 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.68■■□□□ 1.86
RGPD4Q7Z3J3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.68■■□□□ 1.86
RGPD4Q7Z3J3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 AC120498.8-201ENST00000614275 531 ntBASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.67■■□□□ 1.86
RGPD4Q7Z3J3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RGPD4Q7Z3J3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 ANOS2P-203ENST00000472227 1816 ntBASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26.65■■□□□ 1.86
RGPD4Q7Z3J3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
RGPD4Q7Z3J3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.64■■□□□ 1.86
RGPD4Q7Z3J3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC26.64■■□□□ 1.86
RGPD4Q7Z3J3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC26.64■■□□□ 1.86
RGPD4Q7Z3J3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
RGPD4Q7Z3J3 RBM17P1-201ENST00000453646 1190 ntBASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 AF186192.3-201ENST00000583427 947 ntBASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 SAPCD2P4-201ENST00000424595 1171 ntBASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RGPD4Q7Z3J3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms