Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDHR3Q6ZTQ4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 AFG3L1P-217ENST00000557444 2447 ntBASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 TERF1P2-201ENST00000583350 1212 ntBASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 AC092666.2-201ENST00000613287 246 ntBASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDHR3Q6ZTQ4 BX005040.4-201ENST00000637145 1518 ntBASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 TPRG1LP1-201ENST00000598702 760 ntBASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDHR3Q6ZTQ4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 KRT18P14-201ENST00000534205 1250 ntBASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR3Q6ZTQ4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDHR3Q6ZTQ4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.77■□□□□ 0.91
CDHR3Q6ZTQ4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
CDHR3Q6ZTQ4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.77■□□□□ 0.91
CDHR3Q6ZTQ4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDHR3Q6ZTQ4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CDHR3Q6ZTQ4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 AC121338.2-201ENST00000622535 1744 ntBASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDHR3Q6ZTQ4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms