Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 AC073314.1-201ENST00000568729 2216 ntBASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 AL391422.3-201ENST00000603791 2761 ntBASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
ZNF880Q6PDB4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 AC007225.1-201ENST00000566331 1836 ntBASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 SUDS3P1-201ENST00000505831 966 ntBASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 AL354811.1-201ENST00000610286 706 ntBASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 AP004607.4-201ENST00000530158 1459 ntBASIC17.31■□□□□ 0.36
ZNF880Q6PDB4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF880Q6PDB4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZNF880Q6PDB4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 AC061975.6-201ENST00000579045 1553 ntBASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 AC027702.1-201ENST00000563810 1770 ntBASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF880Q6PDB4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms