Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 AC123595.1-201ENST00000440769 1046 ntBASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 AC104564.3-201ENST00000582367 638 ntBASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ATPAF1Q5TC12 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 TPRG1LP1-201ENST00000598702 760 ntBASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATPAF1Q5TC12 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 MIR6084-201ENST00000622012 110 ntBASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.9■□□□□ 0.46
ATPAF1Q5TC12 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATPAF1Q5TC12 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
ATPAF1Q5TC12 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATPAF1Q5TC12 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ATPAF1Q5TC12 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 YBX1P1-201ENST00000445822 960 ntBASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 AC005224.4-201ENST00000583262 1652 ntBASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATPAF1Q5TC12 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.88■□□□□ 0.45
ATPAF1Q5TC12 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
ATPAF1Q5TC12 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
ATPAF1Q5TC12 AL049796.1-201ENST00000565336 1766 ntBASIC17.87■□□□□ 0.45
ATPAF1Q5TC12 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.87■□□□□ 0.45
ATPAF1Q5TC12 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.87■□□□□ 0.45
ATPAF1Q5TC12 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms