Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 DUX4L16-201ENST00000555130 1264 ntBASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 RARRES2P11-201ENST00000635158 484 ntBASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 AC013268.1-206ENST00000638368 961 ntBASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 AC112229.1-201ENST00000639295 961 ntBASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LDLRAP1Q5SW96 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 AC231657.2-201ENST00000624556 255 ntBASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LDLRAP1Q5SW96 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.59■□□□□ 0.89
LDLRAP1Q5SW96 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 AC007322.4-201ENST00000509611 723 ntBASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 AC073111.5-205ENST00000641717 521 ntBASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LDLRAP1Q5SW96 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.58■□□□□ 0.88
LDLRAP1Q5SW96 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LDLRAP1Q5SW96 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
LDLRAP1Q5SW96 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LDLRAP1Q5SW96 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 FEM1AP4-201ENST00000443167 1987 ntBASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LDLRAP1Q5SW96 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 AC007322.1-201ENST00000426983 750 ntBASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.56■□□□□ 0.88
LDLRAP1Q5SW96 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms