Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.85■■□□□ 1.09
PTPN20Q4JDL3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 AC016769.1-201ENST00000409132 1010 ntBASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 AC091799.1-201ENST00000422823 811 ntBASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 KRT18P11-201ENST00000435214 1283 ntBASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 MFSD11-216ENST00000590393 1141 ntBASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 AC006128.1-201ENST00000624704 1661 ntBASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN20Q4JDL3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 AC011484.1-201ENST00000377652 1995 ntBASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 AC010536.3-201ENST00000620306 533 ntBASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN20Q4JDL3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN20Q4JDL3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN20Q4JDL3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN20Q4JDL3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTPN20Q4JDL3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 AC092437.1-201ENST00000624794 1048 ntBASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PTPN20Q4JDL3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.81■■□□□ 1.08
PTPN20Q4JDL3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 IKBKGP1-201ENST00000612193 1073 ntBASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 AC011767.1-201ENST00000617410 1153 ntBASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN20Q4JDL3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 TERF1P5-201ENST00000477545 1207 ntBASIC21.79■■□□□ 1.08
PTPN20Q4JDL3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms