Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.86■■□□□ 1.41
USH1GQ495M9 AC244015.2-201ENST00000616358 1861 ntBASIC23.86■■□□□ 1.41
USH1GQ495M9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.86■■□□□ 1.41
USH1GQ495M9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.86■■□□□ 1.41
USH1GQ495M9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.86■■□□□ 1.41
USH1GQ495M9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
USH1GQ495M9 AC092118.2-201ENST00000613495 667 ntBASIC23.86■■□□□ 1.41
USH1GQ495M9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
USH1GQ495M9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
USH1GQ495M9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
USH1GQ495M9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.85■■□□□ 1.41
USH1GQ495M9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USH1GQ495M9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
USH1GQ495M9 AC007322.3-201ENST00000426526 701 ntBASIC23.85■■□□□ 1.41
USH1GQ495M9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.85■■□□□ 1.41
USH1GQ495M9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.85■■□□□ 1.41
USH1GQ495M9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USH1GQ495M9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USH1GQ495M9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.84■■□□□ 1.41
USH1GQ495M9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USH1GQ495M9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USH1GQ495M9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.84■■□□□ 1.41
USH1GQ495M9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
USH1GQ495M9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.84■■□□□ 1.41
USH1GQ495M9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.84■■□□□ 1.41
USH1GQ495M9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.84■■□□□ 1.41
USH1GQ495M9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.84■■□□□ 1.41
USH1GQ495M9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.84■■□□□ 1.41
USH1GQ495M9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.84■■□□□ 1.41
USH1GQ495M9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USH1GQ495M9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USH1GQ495M9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USH1GQ495M9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.84■■□□□ 1.41
USH1GQ495M9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USH1GQ495M9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
USH1GQ495M9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
USH1GQ495M9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
USH1GQ495M9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
USH1GQ495M9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
USH1GQ495M9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
USH1GQ495M9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.83■■□□□ 1.41
USH1GQ495M9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
USH1GQ495M9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.83■■□□□ 1.4
USH1GQ495M9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.82■■□□□ 1.4
USH1GQ495M9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
USH1GQ495M9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
USH1GQ495M9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.82■■□□□ 1.4
USH1GQ495M9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.82■■□□□ 1.4
USH1GQ495M9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.82■■□□□ 1.4
USH1GQ495M9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.82■■□□□ 1.4
USH1GQ495M9 KRT17P1-201ENST00000399211 1546 ntBASIC23.82■■□□□ 1.4
USH1GQ495M9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.82■■□□□ 1.4
USH1GQ495M9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 Z98882.1-201ENST00000622160 2253 ntBASIC23.82■■□□□ 1.4
USH1GQ495M9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USH1GQ495M9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.82■■□□□ 1.4
USH1GQ495M9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USH1GQ495M9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.81■■□□□ 1.4
USH1GQ495M9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USH1GQ495M9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USH1GQ495M9 ABHD17AP1-201ENST00000358206 933 ntBASIC23.81■■□□□ 1.4
USH1GQ495M9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.81■■□□□ 1.4
USH1GQ495M9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USH1GQ495M9 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.81■■□□□ 1.4
USH1GQ495M9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.81■■□□□ 1.4
USH1GQ495M9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.81■■□□□ 1.4
USH1GQ495M9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
USH1GQ495M9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USH1GQ495M9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.81■■□□□ 1.4
USH1GQ495M9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
USH1GQ495M9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USH1GQ495M9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USH1GQ495M9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
USH1GQ495M9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USH1GQ495M9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.8■■□□□ 1.4
USH1GQ495M9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
USH1GQ495M9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.8■■□□□ 1.4
USH1GQ495M9 DUSP5P2-201ENST00000426873 1033 ntBASIC23.8■■□□□ 1.4
USH1GQ495M9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
USH1GQ495M9 TSPY20P-201ENST00000450910 630 ntBASIC23.8■■□□□ 1.4
USH1GQ495M9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.8■■□□□ 1.4
USH1GQ495M9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.8■■□□□ 1.4
USH1GQ495M9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms