Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 DUX4L26-201ENST00000489078 1255 ntBASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RSPO4Q2I0M5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 AL137013.1-201ENST00000432946 1228 ntBASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.22■□□□□ 0.83
RSPO4Q2I0M5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.21■□□□□ 0.83
RSPO4Q2I0M5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
RSPO4Q2I0M5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 AC120498.8-201ENST00000614275 531 ntBASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 AC004812.2-201ENST00000611079 2094 ntBASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 LINC01568-207ENST00000641790 1380 ntBASIC20.2■□□□□ 0.82
RSPO4Q2I0M5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 TERF1P1-201ENST00000311003 1181 ntBASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 UPK3BP1-201ENST00000428678 509 ntBASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 KRT126P-201ENST00000549467 1181 ntBASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RSPO4Q2I0M5 KRT8P9-201ENST00000558927 1449 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms