Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 POU5F1P4-201ENST00000413175 1085 ntBASIC13.67□□□□□ -0.22
SYCNQ0VAF6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 AC120498.10-201ENST00000621827 505 ntBASIC13.67□□□□□ -0.22
SYCNQ0VAF6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SYCNQ0VAF6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC13.66□□□□□ -0.22
SYCNQ0VAF6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SYCNQ0VAF6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 AC123595.1-201ENST00000440769 1046 ntBASIC13.64□□□□□ -0.23
SYCNQ0VAF6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SYCNQ0VAF6 AC121338.2-201ENST00000622535 1744 ntBASIC13.64□□□□□ -0.23
SYCNQ0VAF6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms