Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCL20P78556 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL20P78556 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL20P78556 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCL20P78556 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.34■□□□□ 0.21
CCL20P78556 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL20P78556 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCL20P78556 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL20P78556 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.34■□□□□ 0.21
CCL20P78556 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL20P78556 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL20P78556 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL20P78556 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL20P78556 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL20P78556 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL20P78556 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL20P78556 FP700111.2-201ENST00000619190 1892 ntBASIC16.33■□□□□ 0.21
CCL20P78556 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCL20P78556 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCL20P78556 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCL20P78556 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CCL20P78556 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCL20P78556 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL20P78556 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCL20P78556 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL20P78556 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL20P78556 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CCL20P78556 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.32■□□□□ 0.2
CCL20P78556 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL20P78556 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL20P78556 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL20P78556 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL20P78556 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 AC009102.2-201ENST00000606772 1639 ntBASIC16.31■□□□□ 0.2
CCL20P78556 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CCL20P78556 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.31■□□□□ 0.2
CCL20P78556 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL20P78556 AL499627.2-201ENST00000606283 725 ntBASIC16.31■□□□□ 0.2
CCL20P78556 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CCL20P78556 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CCL20P78556 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL20P78556 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL20P78556 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL20P78556 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL20P78556 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL20P78556 AC139795.1-202ENST00000500444 432 ntBASIC16.3■□□□□ 0.2
CCL20P78556 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL20P78556 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL20P78556 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CCL20P78556 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL20P78556 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCL20P78556 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL20P78556 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL20P78556 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL20P78556 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL20P78556 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL20P78556 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL20P78556 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL20P78556 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL20P78556 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCL20P78556 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL20P78556 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL20P78556 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL20P78556 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL20P78556 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms