Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.22■□□□□ 0.51
NKX6-1P78426 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX6-1P78426 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX6-1P78426 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.21■□□□□ 0.51
NKX6-1P78426 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.21■□□□□ 0.51
NKX6-1P78426 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX6-1P78426 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX6-1P78426 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX6-1P78426 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NKX6-1P78426 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.21■□□□□ 0.51
NKX6-1P78426 RNA5SP413-201ENST00000516373 109 ntBASIC18.21■□□□□ 0.51
NKX6-1P78426 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NKX6-1P78426 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX6-1P78426 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NKX6-1P78426 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
NKX6-1P78426 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX6-1P78426 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NKX6-1P78426 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.21■□□□□ 0.5
NKX6-1P78426 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 AC010542.4-201ENST00000563151 1910 ntBASIC18.2■□□□□ 0.5
NKX6-1P78426 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.2■□□□□ 0.5
NKX6-1P78426 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.2■□□□□ 0.5
NKX6-1P78426 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.2■□□□□ 0.5
NKX6-1P78426 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.2■□□□□ 0.5
NKX6-1P78426 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NKX6-1P78426 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NKX6-1P78426 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NKX6-1P78426 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX6-1P78426 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX6-1P78426 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX6-1P78426 CNN2P6-201ENST00000439038 900 ntBASIC18.19■□□□□ 0.5
NKX6-1P78426 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NKX6-1P78426 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NKX6-1P78426 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 AC098934.4-201ENST00000564127 592 ntBASIC18.19■□□□□ 0.5
NKX6-1P78426 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX6-1P78426 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX6-1P78426 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NKX6-1P78426 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.18■□□□□ 0.5
NKX6-1P78426 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.18■□□□□ 0.5
NKX6-1P78426 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
NKX6-1P78426 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.18■□□□□ 0.5
NKX6-1P78426 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.18■□□□□ 0.5
NKX6-1P78426 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.18■□□□□ 0.5
NKX6-1P78426 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 AC010536.3-201ENST00000620306 533 ntBASIC18.18■□□□□ 0.5
NKX6-1P78426 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.18■□□□□ 0.5
NKX6-1P78426 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX6-1P78426 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NKX6-1P78426 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NKX6-1P78426 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.17■□□□□ 0.5
NKX6-1P78426 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.17■□□□□ 0.5
NKX6-1P78426 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.17■□□□□ 0.5
NKX6-1P78426 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NKX6-1P78426 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NKX6-1P78426 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NKX6-1P78426 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NKX6-1P78426 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
NKX6-1P78426 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX6-1P78426 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX6-1P78426 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX6-1P78426 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX6-1P78426 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX6-1P78426 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NKX6-1P78426 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NKX6-1P78426 POU5F1P4-201ENST00000413175 1085 ntBASIC18.16■□□□□ 0.5
NKX6-1P78426 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.16■□□□□ 0.5
NKX6-1P78426 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX6-1P78426 SLC7A5P1-201ENST00000568957 537 ntBASIC18.16■□□□□ 0.5
NKX6-1P78426 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NKX6-1P78426 AC008175.2-201ENST00000612840 297 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms