Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.05■□□□□ 0.48
SEC61A1P61619 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.05■□□□□ 0.48
SEC61A1P61619 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.05■□□□□ 0.48
SEC61A1P61619 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SEC61A1P61619 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SEC61A1P61619 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SEC61A1P61619 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SEC61A1P61619 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SEC61A1P61619 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.05■□□□□ 0.48
SEC61A1P61619 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.04■□□□□ 0.48
SEC61A1P61619 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.04■□□□□ 0.48
SEC61A1P61619 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SEC61A1P61619 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.04■□□□□ 0.48
SEC61A1P61619 TERF1P2-201ENST00000583350 1212 ntBASIC18.04■□□□□ 0.48
SEC61A1P61619 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.04■□□□□ 0.48
SEC61A1P61619 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SEC61A1P61619 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SEC61A1P61619 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SEC61A1P61619 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.03■□□□□ 0.48
SEC61A1P61619 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SEC61A1P61619 TPRG1LP1-201ENST00000598702 760 ntBASIC18.03■□□□□ 0.48
SEC61A1P61619 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.03■□□□□ 0.48
SEC61A1P61619 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.03■□□□□ 0.48
SEC61A1P61619 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SEC61A1P61619 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SEC61A1P61619 BX005040.4-201ENST00000637145 1518 ntBASIC18.03■□□□□ 0.48
SEC61A1P61619 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.02■□□□□ 0.48
SEC61A1P61619 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.02■□□□□ 0.48
SEC61A1P61619 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SEC61A1P61619 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.02■□□□□ 0.48
SEC61A1P61619 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.02■□□□□ 0.48
SEC61A1P61619 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.02■□□□□ 0.48
SEC61A1P61619 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.02■□□□□ 0.48
SEC61A1P61619 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.02■□□□□ 0.48
SEC61A1P61619 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SEC61A1P61619 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SEC61A1P61619 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.02■□□□□ 0.47
SEC61A1P61619 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SEC61A1P61619 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SEC61A1P61619 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SEC61A1P61619 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.02■□□□□ 0.47
SEC61A1P61619 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SEC61A1P61619 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.01■□□□□ 0.47
SEC61A1P61619 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.01■□□□□ 0.47
SEC61A1P61619 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.01■□□□□ 0.47
SEC61A1P61619 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SEC61A1P61619 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SEC61A1P61619 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SEC61A1P61619 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.01■□□□□ 0.47
SEC61A1P61619 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.01■□□□□ 0.47
SEC61A1P61619 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.01■□□□□ 0.47
SEC61A1P61619 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.01■□□□□ 0.47
SEC61A1P61619 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SEC61A1P61619 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61A1P61619 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms