Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 AC112907.3-201ENST00000577781 2400 ntBASIC16.28■□□□□ 0.2
RAB5BP61020 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB5BP61020 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB5BP61020 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB5BP61020 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB5BP61020 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB5BP61020 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB5BP61020 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5BP61020 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RAB5BP61020 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5BP61020 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB5BP61020 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5BP61020 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5BP61020 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5BP61020 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5BP61020 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB5BP61020 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5BP61020 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB5BP61020 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5BP61020 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB5BP61020 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5BP61020 AL353803.4-201ENST00000565882 1934 ntBASIC16.27■□□□□ 0.19
RAB5BP61020 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RAB5BP61020 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
RAB5BP61020 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5BP61020 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB5BP61020 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RAB5BP61020 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAB5BP61020 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 AC093503.3-201ENST00000624917 2352 ntBASIC16.26■□□□□ 0.19
RAB5BP61020 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
RAB5BP61020 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RAB5BP61020 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB5BP61020 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAB5BP61020 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB5BP61020 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RAB5BP61020 AC106820.2-201ENST00000563775 3264 ntBASIC16.25■□□□□ 0.19
RAB5BP61020 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB5BP61020 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RAB5BP61020 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RAB5BP61020 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 AC126177.7-201ENST00000547904 679 ntBASIC16.25■□□□□ 0.19
RAB5BP61020 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB5BP61020 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAB5BP61020 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB5BP61020 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB5BP61020 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB5BP61020 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB5BP61020 AC079598.2-202ENST00000546624 1451 ntBASIC16.24■□□□□ 0.19
RAB5BP61020 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 AP000997.3-201ENST00000623333 2250 ntBASIC16.24■□□□□ 0.19
RAB5BP61020 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB5BP61020 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms