Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VSX2P58304 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.86■□□□□ 0.77
VSX2P58304 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VSX2P58304 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.86■□□□□ 0.77
VSX2P58304 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VSX2P58304 ID1-201ENST00000376105 1233 ntBASIC19.86■□□□□ 0.77
VSX2P58304 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.86■□□□□ 0.77
VSX2P58304 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VSX2P58304 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VSX2P58304 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
VSX2P58304 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.85■□□□□ 0.77
VSX2P58304 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VSX2P58304 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
VSX2P58304 CYP2T1P-201ENST00000432607 1285 ntBASIC19.85■□□□□ 0.77
VSX2P58304 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 AL591742.1-201ENST00000604433 565 ntBASIC19.85■□□□□ 0.77
VSX2P58304 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.85■□□□□ 0.77
VSX2P58304 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
VSX2P58304 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VSX2P58304 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
VSX2P58304 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VSX2P58304 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
VSX2P58304 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.84■□□□□ 0.77
VSX2P58304 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VSX2P58304 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.84■□□□□ 0.77
VSX2P58304 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.84■□□□□ 0.77
VSX2P58304 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.84■□□□□ 0.77
VSX2P58304 HLA-L-209ENST00000420110 1011 ntBASIC19.84■□□□□ 0.77
VSX2P58304 NCF1B-203ENST00000435988 1254 ntBASIC19.84■□□□□ 0.77
VSX2P58304 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.84■□□□□ 0.77
VSX2P58304 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.84■□□□□ 0.77
VSX2P58304 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.84■□□□□ 0.77
VSX2P58304 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.84■□□□□ 0.77
VSX2P58304 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VSX2P58304 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
VSX2P58304 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.83■□□□□ 0.77
VSX2P58304 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VSX2P58304 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
VSX2P58304 AC091799.1-201ENST00000422823 811 ntBASIC19.83■□□□□ 0.77
VSX2P58304 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.83■□□□□ 0.77
VSX2P58304 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.83■□□□□ 0.77
VSX2P58304 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
VSX2P58304 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.83■□□□□ 0.77
VSX2P58304 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.83■□□□□ 0.77
VSX2P58304 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.83■□□□□ 0.77
VSX2P58304 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.83■□□□□ 0.77
VSX2P58304 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
VSX2P58304 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VSX2P58304 AL121832.2-201ENST00000610979 668 ntBASIC19.83■□□□□ 0.77
VSX2P58304 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VSX2P58304 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
VSX2P58304 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.83■□□□□ 0.76
VSX2P58304 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
VSX2P58304 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VSX2P58304 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VSX2P58304 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
VSX2P58304 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VSX2P58304 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VSX2P58304 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.83■□□□□ 0.76
VSX2P58304 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
VSX2P58304 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VSX2P58304 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 GPX1P1-201ENST00000388829 606 ntBASIC19.82■□□□□ 0.76
VSX2P58304 AC083906.2-201ENST00000511578 360 ntBASIC19.82■□□□□ 0.76
VSX2P58304 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.82■□□□□ 0.76
VSX2P58304 AC008694.1-202ENST00000636953 945 ntBASIC19.82■□□□□ 0.76
VSX2P58304 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VSX2P58304 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VSX2P58304 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.82■□□□□ 0.76
VSX2P58304 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.82■□□□□ 0.76
VSX2P58304 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VSX2P58304 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.81■□□□□ 0.76
VSX2P58304 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VSX2P58304 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VSX2P58304 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.81■□□□□ 0.76
VSX2P58304 AC105036.2-201ENST00000569468 176 ntBASIC19.81■□□□□ 0.76
VSX2P58304 AL109923.1-201ENST00000618799 583 ntBASIC19.81■□□□□ 0.76
VSX2P58304 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.81■□□□□ 0.76
VSX2P58304 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VSX2P58304 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VSX2P58304 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.81■□□□□ 0.76
VSX2P58304 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VSX2P58304 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.81■□□□□ 0.76
VSX2P58304 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms