Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH15P55291 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH15P55291 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDH15P55291 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH15P55291 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH15P55291 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH15P55291 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH15P55291 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH15P55291 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH15P55291 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH15P55291 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH15P55291 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.27■□□□□ 0.68
CDH15P55291 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH15P55291 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH15P55291 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH15P55291 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH15P55291 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH15P55291 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CDH15P55291 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH15P55291 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDH15P55291 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH15P55291 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH15P55291 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH15P55291 AC020907.5-201ENST00000624372 1936 ntBASIC19.26■□□□□ 0.67
CDH15P55291 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH15P55291 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH15P55291 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH15P55291 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH15P55291 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH15P55291 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CDH15P55291 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH15P55291 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDH15P55291 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDH15P55291 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH15P55291 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDH15P55291 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDH15P55291 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH15P55291 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CDH15P55291 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH15P55291 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH15P55291 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH15P55291 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.25■□□□□ 0.67
CDH15P55291 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH15P55291 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH15P55291 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH15P55291 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDH15P55291 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH15P55291 BX323043.1-201ENST00000641006 1765 ntBASIC19.24■□□□□ 0.67
CDH15P55291 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH15P55291 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH15P55291 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 AC005837.3-201ENST00000612163 286 ntBASIC19.24■□□□□ 0.67
CDH15P55291 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH15P55291 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH15P55291 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH15P55291 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH15P55291 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH15P55291 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CDH15P55291 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH15P55291 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH15P55291 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 AC133561.4-201ENST00000566112 224 ntBASIC19.23■□□□□ 0.67
CDH15P55291 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CDH15P55291 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH15P55291 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH15P55291 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms