Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS2P54278 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PMS2P54278 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.35■■□□□ 1.01
PMS2P54278 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PMS2P54278 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
PMS2P54278 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.35■■□□□ 1.01
PMS2P54278 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.35■■□□□ 1.01
PMS2P54278 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PMS2P54278 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.35■■□□□ 1.01
PMS2P54278 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.35■■□□□ 1.01
PMS2P54278 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS2P54278 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PMS2P54278 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PMS2P54278 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PMS2P54278 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PMS2P54278 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.34■■□□□ 1.01
PMS2P54278 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PMS2P54278 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.34■■□□□ 1.01
PMS2P54278 MIR4767-201ENST00000582827 78 ntBASIC21.34■■□□□ 1.01
PMS2P54278 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS2P54278 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PMS2P54278 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PMS2P54278 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PMS2P54278 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PMS2P54278 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.33■■□□□ 1.01
PMS2P54278 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PMS2P54278 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.33■■□□□ 1.01
PMS2P54278 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PMS2P54278 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PMS2P54278 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
PMS2P54278 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.33■■□□□ 1
PMS2P54278 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PMS2P54278 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PMS2P54278 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.32■■□□□ 1
PMS2P54278 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.32■■□□□ 1
PMS2P54278 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.32■■□□□ 1
PMS2P54278 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PMS2P54278 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PMS2P54278 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PMS2P54278 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.32■■□□□ 1
PMS2P54278 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.32■■□□□ 1
PMS2P54278 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.32■■□□□ 1
PMS2P54278 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PMS2P54278 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
PMS2P54278 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.31■■□□□ 1
PMS2P54278 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PMS2P54278 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.31■■□□□ 1
PMS2P54278 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.31■■□□□ 1
PMS2P54278 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PMS2P54278 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PMS2P54278 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PMS2P54278 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.31■■□□□ 1
PMS2P54278 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.31■■□□□ 1
PMS2P54278 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PMS2P54278 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.31■■□□□ 1
PMS2P54278 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.31■■□□□ 1
PMS2P54278 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
PMS2P54278 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PMS2P54278 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PMS2P54278 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.31■■□□□ 1
PMS2P54278 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PMS2P54278 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.3■■□□□ 1
PMS2P54278 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.3■■□□□ 1
PMS2P54278 AC112907.3-201ENST00000577781 2400 ntBASIC21.3■■□□□ 1
PMS2P54278 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PMS2P54278 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.3■■□□□ 1
PMS2P54278 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PMS2P54278 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PMS2P54278 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PMS2P54278 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PMS2P54278 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.3■■□□□ 1
PMS2P54278 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.3■■□□□ 1
PMS2P54278 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.3■■□□□ 1
PMS2P54278 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.3■■□□□ 1
PMS2P54278 MIR6821-201ENST00000617625 74 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms