Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.16■□□□□ 0.82
PDX1P52945 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.15■□□□□ 0.82
PDX1P52945 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.15■□□□□ 0.82
PDX1P52945 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.15■□□□□ 0.82
PDX1P52945 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
PDX1P52945 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.15■□□□□ 0.82
PDX1P52945 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PDX1P52945 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 AC003102.1-202ENST00000563394 1796 ntBASIC20.15■□□□□ 0.82
PDX1P52945 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDX1P52945 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.14■□□□□ 0.81
PDX1P52945 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PDX1P52945 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDX1P52945 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDX1P52945 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDX1P52945 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDX1P52945 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDX1P52945 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDX1P52945 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDX1P52945 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDX1P52945 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.14■□□□□ 0.81
PDX1P52945 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PDX1P52945 GCSHP5-201ENST00000443090 522 ntBASIC20.14■□□□□ 0.81
PDX1P52945 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.14■□□□□ 0.81
PDX1P52945 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.14■□□□□ 0.81
PDX1P52945 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.14■□□□□ 0.81
PDX1P52945 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDX1P52945 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDX1P52945 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PDX1P52945 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.13■□□□□ 0.81
PDX1P52945 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.13■□□□□ 0.81
PDX1P52945 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDX1P52945 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDX1P52945 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDX1P52945 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDX1P52945 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.13■□□□□ 0.81
PDX1P52945 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.13■□□□□ 0.81
PDX1P52945 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDX1P52945 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDX1P52945 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDX1P52945 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDX1P52945 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDX1P52945 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.12■□□□□ 0.81
PDX1P52945 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDX1P52945 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.12■□□□□ 0.81
PDX1P52945 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDX1P52945 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.12■□□□□ 0.81
PDX1P52945 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDX1P52945 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.12■□□□□ 0.81
PDX1P52945 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.12■□□□□ 0.81
PDX1P52945 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.12■□□□□ 0.81
PDX1P52945 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDX1P52945 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.12■□□□□ 0.81
PDX1P52945 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDX1P52945 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDX1P52945 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDX1P52945 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDX1P52945 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDX1P52945 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PDX1P52945 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.11■□□□□ 0.81
PDX1P52945 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 CLDN5-201ENST00000403084 2357 ntBASIC20.11■□□□□ 0.81
PDX1P52945 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.11■□□□□ 0.81
PDX1P52945 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.11■□□□□ 0.81
PDX1P52945 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.11■□□□□ 0.81
PDX1P52945 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PDX1P52945 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.11■□□□□ 0.81
PDX1P52945 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDX1P52945 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDX1P52945 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PDX1P52945 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDX1P52945 FBXW4P1-201ENST00000426721 2239 ntBASIC20.1■□□□□ 0.81
PDX1P52945 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDX1P52945 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.1■□□□□ 0.81
PDX1P52945 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDX1P52945 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PDX1P52945 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDX1P52945 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.1■□□□□ 0.81
PDX1P52945 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.1■□□□□ 0.81
PDX1P52945 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDX1P52945 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.1■□□□□ 0.81
PDX1P52945 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.1■□□□□ 0.81
PDX1P52945 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms