Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.7■□□□□ 0.9
RXRGP48443 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
RXRGP48443 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RXRGP48443 RNA5SP413-201ENST00000516373 109 ntBASIC20.7■□□□□ 0.9
RXRGP48443 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.7■□□□□ 0.9
RXRGP48443 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RXRGP48443 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.7■□□□□ 0.9
RXRGP48443 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RXRGP48443 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
RXRGP48443 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.69■□□□□ 0.9
RXRGP48443 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.69■□□□□ 0.9
RXRGP48443 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
RXRGP48443 BX276092.2-201ENST00000417668 665 ntBASIC20.69■□□□□ 0.9
RXRGP48443 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRGP48443 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRGP48443 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.69■□□□□ 0.9
RXRGP48443 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRGP48443 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.69■□□□□ 0.9
RXRGP48443 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.69■□□□□ 0.9
RXRGP48443 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RXRGP48443 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
RXRGP48443 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.68■□□□□ 0.9
RXRGP48443 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.68■□□□□ 0.9
RXRGP48443 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.68■□□□□ 0.9
RXRGP48443 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 MYC-209ENST00000641252 345 ntBASIC20.68■□□□□ 0.9
RXRGP48443 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RXRGP48443 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 AC139530.1-201ENST00000575312 1977 ntBASIC20.68■□□□□ 0.9
RXRGP48443 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRGP48443 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 C11orf96-202ENST00000528572 1834 ntBASIC20.67■□□□□ 0.9
RXRGP48443 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRGP48443 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.67■□□□□ 0.9
RXRGP48443 AC008687.6-201ENST00000596318 630 ntBASIC20.67■□□□□ 0.9
RXRGP48443 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.67■□□□□ 0.9
RXRGP48443 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRGP48443 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRGP48443 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRGP48443 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
RXRGP48443 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 AC097658.1-201ENST00000475555 843 ntBASIC20.66■□□□□ 0.9
RXRGP48443 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.66■□□□□ 0.9
RXRGP48443 RARRES2P4-201ENST00000514074 484 ntBASIC20.66■□□□□ 0.9
RXRGP48443 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.66■□□□□ 0.9
RXRGP48443 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RXRGP48443 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 AL137060.1-201ENST00000618151 2648 ntBASIC20.66■□□□□ 0.9
RXRGP48443 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RXRGP48443 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRGP48443 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRGP48443 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RXRGP48443 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RXRGP48443 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.65■□□□□ 0.9
RXRGP48443 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RXRGP48443 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRGP48443 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.65■□□□□ 0.9
RXRGP48443 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RXRGP48443 KRT18P29-201ENST00000397031 1267 ntBASIC20.65■□□□□ 0.9
RXRGP48443 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.65■□□□□ 0.9
RXRGP48443 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.65■□□□□ 0.9
RXRGP48443 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.65■□□□□ 0.9
RXRGP48443 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.65■□□□□ 0.9
RXRGP48443 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.65■□□□□ 0.9
RXRGP48443 AC083880.1-201ENST00000608266 535 ntBASIC20.65■□□□□ 0.9
RXRGP48443 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.65■□□□□ 0.9
RXRGP48443 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms