Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA4P43681 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CHRNA4P43681 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA4P43681 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA4P43681 AC245052.3-201ENST00000450182 901 ntBASIC20.92■□□□□ 0.94
CHRNA4P43681 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 AC137761.2-201ENST00000561729 223 ntBASIC20.92■□□□□ 0.94
CHRNA4P43681 AC145350.3-201ENST00000569033 163 ntBASIC20.92■□□□□ 0.94
CHRNA4P43681 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
CHRNA4P43681 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA4P43681 MYCNOS-205ENST00000641950 531 ntBASIC20.92■□□□□ 0.94
CHRNA4P43681 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CHRNA4P43681 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA4P43681 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA4P43681 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
CHRNA4P43681 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CHRNA4P43681 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.91■□□□□ 0.94
CHRNA4P43681 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.91■□□□□ 0.94
CHRNA4P43681 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.91■□□□□ 0.94
CHRNA4P43681 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.91■□□□□ 0.94
CHRNA4P43681 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CHRNA4P43681 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA4P43681 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA4P43681 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CHRNA4P43681 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA4P43681 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.9■□□□□ 0.94
CHRNA4P43681 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA4P43681 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 RBM17P2-201ENST00000616397 1405 ntBASIC20.9■□□□□ 0.94
CHRNA4P43681 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.9■□□□□ 0.94
CHRNA4P43681 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.9■□□□□ 0.94
CHRNA4P43681 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA4P43681 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.9■□□□□ 0.94
CHRNA4P43681 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA4P43681 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA4P43681 AC006128.1-201ENST00000624704 1661 ntBASIC20.89■□□□□ 0.94
CHRNA4P43681 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA4P43681 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA4P43681 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.89■□□□□ 0.94
CHRNA4P43681 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA4P43681 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHRNA4P43681 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.89■□□□□ 0.94
CHRNA4P43681 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA4P43681 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA4P43681 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CHRNA4P43681 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA4P43681 SLC7A5P1-201ENST00000568957 537 ntBASIC20.89■□□□□ 0.93
CHRNA4P43681 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.89■□□□□ 0.93
CHRNA4P43681 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.89■□□□□ 0.93
CHRNA4P43681 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA4P43681 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA4P43681 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA4P43681 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA4P43681 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA4P43681 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA4P43681 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHRNA4P43681 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA4P43681 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA4P43681 AL157384.1-201ENST00000445995 2473 ntBASIC20.88■□□□□ 0.93
CHRNA4P43681 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA4P43681 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHRNA4P43681 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA4P43681 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA4P43681 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRNA4P43681 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRNA4P43681 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA4P43681 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.88■□□□□ 0.93
CHRNA4P43681 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA4P43681 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA4P43681 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms